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LOC125201850 mitochondrial arginine transporter BAC1-like [ Salvia hispanica ]

Gene ID: 125201850, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125201850
Gene description
mitochondrial arginine transporter BAC1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia hispanica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia incertae sedis
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Genomic context

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See LOC125201850 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current UniMelb_Shisp_WGS_1.0 (GCF_023119035.1) 1 NC_062965.1 (19599601..19604810)

Chromosome 1 - NC_062965.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor 12 Neighboring gene dormancy-associated protein 1-like Neighboring gene squamosa promoter-binding protein 1-like Neighboring gene dof zinc finger protein DOF1.4 Neighboring gene dof zinc finger protein DOF4.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062965.1 Chromosome 1 Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia hispanica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

Genomic

  1. NC_062965.1 Reference UniMelb_Shisp_WGS_1.0 Primary Assembly

    Range
    19599601..19604810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048100123.1 → XP_047956080.1  mitochondrial arginine transporter BAC1-like isoform X4

  2. XM_048100120.1 → XP_047956077.1  mitochondrial arginine transporter BAC1-like isoform X1

  3. XM_048100116.1 → XP_047956073.1  mitochondrial arginine transporter BAC1-like isoform X1

  4. XM_048100119.1 → XP_047956076.1  mitochondrial arginine transporter BAC1-like isoform X1

  5. XM_048100117.1 → XP_047956074.1  mitochondrial arginine transporter BAC1-like isoform X1

  6. XM_048100124.1 → XP_047956081.1  mitochondrial arginine transporter BAC1-like isoform X5

  7. XM_048100118.1 → XP_047956075.1  mitochondrial arginine transporter BAC1-like isoform X2

  8. XM_048100122.1 → XP_047956079.1  mitochondrial arginine transporter BAC1-like isoform X3

  9. XM_048100121.1 → XP_047956078.1  mitochondrial arginine transporter BAC1-like isoform X1

  10. XM_048100125.1 → XP_047956082.1  mitochondrial arginine transporter BAC1-like isoform X6

Nucleotide Protein
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