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STM0162 putative inner membrane protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1251680, updated on 6-Oct-2023

Summary

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Gene symbol
STM0162
Gene description
putative inner membrane protein
Locus tag
STM0162
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (191145..192421)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative restriction endonuclease Neighboring gene putative cytoplasmic protein Neighboring gene 2-keto-3-deoxygluconate permease Neighboring gene pyridoxine phosphate biosynthetic protein Neighboring gene putative LysR family transcriptional regulator Neighboring gene S-adenosylmethionine decarboxylase, proenzyme

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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regulatory

  • Loc: 191145-191150 regulatory_class = ribosome_binding_site
  • Loc: 192403-192408 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
putative inner membrane protein
NP_459167.1
  • similar to E. coli orf, hypothetical protein (AAC75779.1); Blastp hit to AAC75779.1 (388 aa), 28% identity in aa 2 - 384

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    191145..192421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_459167.1 putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_459167.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5I0CW17, A0A5W0KR79, A0A5W8WBS4, A0A5Y2NL39, A0A602Z2X0, A0A639YST6, A0A713S106, A0A750ILQ7
    Conserved Domains (1) summary
    COG3395
    Location:1 → 417
    YgbK; Uncharacterized conserved protein YgbK, DUF1537 family [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8ZRS5.1

Gene LinkOut

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