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CHRNA1 cholinergic receptor nicotinic alpha 1 subunit [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125095758, updated on 22-Mar-2024

Summary

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Gene symbol
CHRNA1
Gene description
cholinergic receptor nicotinic alpha 1 subunit
See related
EnsemblRapid:ENSLLUG00010018221
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
Orthologs
human mouse all
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Genomic context

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See CHRNA1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) 3 NC_062280.1 (71456854..71474511, complement)

Chromosome 3 - NC_062280.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein D-like Neighboring gene WAS/WASL interacting protein family member 1 Neighboring gene formin-like protein 5 Neighboring gene 40S ribosomal protein S6-like Neighboring gene chimerin 1 Neighboring gene uncharacterized LOC125096022

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062280.1 Chromosome 3 Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha
Names
cholinergic receptor, nicotinic alpha polypeptide 1
nicotinic cholinergic receptor alpha polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062280.1 Reference mLutLut1.2 Primary Assembly

    Range
    71456854..71474511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047722226.1 → XP_047578182.1  acetylcholine receptor subunit alpha

    Related
    ENSLLUP00010024938.1, ENSLLUT00010028683.1
Nucleotide Protein
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