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SCD5 stearoyl-CoA desaturase 5 [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125094210, updated on 22-Mar-2024

Summary

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Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
Orthologs
human mouse all
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Genomic context

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See SCD5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) 2 NC_062279.1 (209850379..209930595, complement)

Chromosome 2 - NC_062279.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 150C Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene basic proline-rich protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC125094528 Neighboring gene SEC31 homolog A, COPII coat complex component

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062279.1 Chromosome 2 Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062279.1 Reference mLutLut1.2 Primary Assembly

    Range
    209850379..209930595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047719877.1 → XP_047575833.1  stearoyl-CoA desaturase 5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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