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LOC125092606 ATP-dependent RNA helicase DDX3X-like [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125092606, updated on 2-Nov-2023

Summary

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Gene symbol
LOC125092606
Gene description
ATP-dependent RNA helicase DDX3X-like
See related
EnsemblRapid:ENSLLUG00010000823
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
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Genomic context

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See LOC125092606 in Genome Data Viewer
Location:
chromosome: Y
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) Y NC_062297.1 (319650..336623, complement)

Chromosome Y - NC_062297.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125092636 Neighboring gene lysine-specific demethylase 6A-like Neighboring gene probable ubiquitin carboxyl-terminal hydrolase FAF-X Neighboring gene splicing factor, proline- and glutamine-rich-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062297.1 Chromosome Y Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gamete generation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX3X-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062297.1 Reference mLutLut1.2 Primary Assembly

    Range
    319650..336623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047717010.1 → XP_047572966.1  ATP-dependent RNA helicase DDX3X-like isoform X2

  2. XM_047717009.1 → XP_047572965.1  ATP-dependent RNA helicase DDX3X-like isoform X1

    Related
    ENSLLUP00010000985.1, ENSLLUT00010001198.1

  3. XM_047717011.1 → XP_047572967.1  ATP-dependent RNA helicase DDX3X-like isoform X3

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases