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VASP vasodilator stimulated phosphoprotein [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125090033, updated on 22-Mar-2024

Summary

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Gene symbol
VASP
Gene description
vasodilator stimulated phosphoprotein
See related
EnsemblRapid:ENSLLUG00010022105
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
Orthologs
human mouse all
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Genomic context

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See VASP in Genome Data Viewer
Location:
chromosome: 17
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) 17 NC_062294.1 (49872336..49885206)

Chromosome 17 - NC_062294.1Genomic Context describing neighboring genes Neighboring gene reticulon 2 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) Neighboring gene outer mitochondrial membrane lipid metabolism regulator OPA3 Neighboring gene uncharacterized LOC125090036 Neighboring gene G protein-coupled receptor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062294.1 Chromosome 17 Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables profilin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural tube closure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homotetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasodilator-stimulated phosphoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062294.1 Reference mLutLut1.2 Primary Assembly

    Range
    49872336..49885206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047712599.1 → XP_047568555.1  vasodilator-stimulated phosphoprotein isoform X3

    Related
    ENSLLUP00010030299.1, ENSLLUT00010034632.1

  2. XM_047712598.1 → XP_047568554.1  vasodilator-stimulated phosphoprotein isoform X2

  3. XM_047712597.1 → XP_047568553.1  vasodilator-stimulated phosphoprotein isoform X1

    Related
    ENSLLUP00010030304.1, ENSLLUT00010034638.1
Nucleotide Protein
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Gene LinkOut

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