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KPTN kaptin, actin binding protein [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125089824, updated on 22-Mar-2024

Summary

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Gene symbol
KPTN
Gene description
kaptin, actin binding protein
See related
EnsemblRapid:ENSLLUG00010014322
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
Orthologs
human mouse all
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Genomic context

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See KPTN in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) 17 NC_062294.1 (51255137..51262295, complement)

Chromosome 17 - NC_062294.1Genomic Context describing neighboring genes Neighboring gene Meis homeobox 3 Neighboring gene solute carrier family 8 member A2 Neighboring gene NSF attachment protein alpha Neighboring gene zinc finger protein 541

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062294.1 Chromosome 17 Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062294.1 Reference mLutLut1.2 Primary Assembly

    Range
    51255137..51262295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047712289.1 → XP_047568245.1  KICSTOR complex protein kaptin isoform X2

  2. XM_047712288.1 → XP_047568244.1  KICSTOR complex protein kaptin isoform X1

    Related
    ENSLLUP00010019466.1, ENSLLUT00010022596.1
Nucleotide Protein
Heading Accession and Version

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