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LOC125086058 torsin-1A-interacting protein 2-like [ Lutra lutra (Eurasian river otter) ]

Gene ID: 125086058, updated on 2-Nov-2023

Summary

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Gene symbol
LOC125086058
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSLLUG00010004414
Gene type
protein coding
RefSeq status
MODEL
Organism
Lutra lutra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra
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Genomic context

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See LOC125086058 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mLutLut1.2 (GCF_902655055.1) 15 NC_062292.1 (16013471..16056242, complement)

Chromosome 15 - NC_062292.1Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 2 Neighboring gene uncharacterized LOC125086383 Neighboring gene L-lactate dehydrogenase B chain-like Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin 1A interacting protein 1 Neighboring gene U4 spliceosomal RNA Neighboring gene centrosomal protein 350 Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062292.1 Chromosome 15 Reference mLutLut1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902655055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLutLut1.2 Primary Assembly

Genomic

  1. NC_062292.1 Reference mLutLut1.2 Primary Assembly

    Range
    16013471..16056242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047705109.1 → XP_047561065.1  torsin-1A-interacting protein 2-like

  2. XM_047705108.1 → XP_047561064.1  torsin-1A-interacting protein 2-like

  3. XM_047705107.1 → XP_047561063.1  torsin-1A-interacting protein 2-like

  4. XM_047705106.1 → XP_047561062.1  torsin-1A-interacting protein 2-like

    Related
    ENSLLUP00010005726.1, ENSLLUT00010006835.1
Nucleotide Protein
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Molecular Biology Databases