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LOC125078106 mitogen-activated protein kinase 9 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 125078106, updated on 17-Jul-2024

Summary

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Gene symbol
LOC125078106
Gene description
mitogen-activated protein kinase 9
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC125078106 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (29175268..29181140)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107281010 Neighboring gene solanesyl-diphosphate synthase 2, chloroplastic Neighboring gene serine carboxypeptidase-like 50 Neighboring gene serine carboxypeptidase-like 50

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089039.1 Chromosome 5 Reference ASM3414082v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase 9
NP_001391712.1
NP_001391714.1
XP_066166309.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001404783.1 → NP_001391712.1  mitogen-activated protein kinase 9 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK069254, AP014961, CI341621, CI601546

  2. NM_001404785.1 → NP_001391714.1  mitogen-activated protein kinase 9 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK069254, AP014961, CI341621, CI601546

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    29175268..29181140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066310212.1 → XP_066166309.1  mitogen-activated protein kinase 9 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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