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LOC125061599 delta-sarcoglycan-like [ Pieris napi ]

Gene ID: 125061599, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125061599
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:ENSPNPG00015041806
Gene type
protein coding
RefSeq status
MODEL
Organism
Pieris napi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Pieridae; Pierinae; Pieris
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Genomic context

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See LOC125061599 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ilPieNapi1.2 (GCF_905475465.1) 23 NC_062256.1 (9251735..9295500)

Chromosome 23 - NC_062256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized oxidoreductase YrbE-like Neighboring gene delta-sarcoglycan-like Neighboring gene uncharacterized LOC125061139 Neighboring gene uncharacterized LOC125061556

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062256.1 Chromosome 23 Reference ilPieNapi1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pieris napi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilPieNapi1.2

Genomic

  1. NC_062256.1 Reference ilPieNapi1.2

    Range
    9251735..9295500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047667104.1 → XP_047523060.1  delta-sarcoglycan-like

  2. XM_047667106.1 → XP_047523062.1  delta-sarcoglycan-like

    Related
    ENSPNPP00015045378.1, ENSPNPT00015052190.1

  3. XM_047667105.1 → XP_047523061.1  delta-sarcoglycan-like

    Related
    ENSPNPP00015058371.1, ENSPNPT00015056130.1
Nucleotide Protein
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