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LOC125047097 irregular chiasm C-roughest protein-like [ Penaeus chinensis ]

Gene ID: 125047097, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125047097
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC125047097
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus chinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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Genomic context

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See LOC125047097 in Genome Data Viewer
Location:
chromosome: 40
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM1920278v2 (GCF_019202785.1) 40 NC_061858.1 (945415..987924, complement)

Chromosome 40 - NC_061858.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125047009 Neighboring gene dopamine receptor 1-like Neighboring gene cell division protein ZipA-like Neighboring gene uncharacterized LOC125047286

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061858.1 Chromosome 40 Reference ASM1920278v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus chinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1920278v2 Primary Assembly

Genomic

  1. NC_061858.1 Reference ASM1920278v2 Primary Assembly

    Range
    945415..987924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047645204.1 → XP_047501160.1  irregular chiasm C-roughest protein-like isoform X2

    Related
    XP_047501160.1, XM_047645204.1

  2. XM_047645203.1 → XP_047501159.1  irregular chiasm C-roughest protein-like isoform X1

    Related
    XP_047501159.1, XM_047645203.1
Nucleotide Protein
Heading Accession and Version

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