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LOC125044261 carotenoid isomerooxygenase-like [ Penaeus chinensis ]

Gene ID: 125044261, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125044261
Gene description
carotenoid isomerooxygenase-like
See related
EnsemblRapid:LOC125044261
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus chinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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Genomic context

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See LOC125044261 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1920278v2 (GCF_019202785.1) 35 NC_061853.1 (37122530..37141760, complement)

Chromosome 35 - NC_061853.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125044219 Neighboring gene uncharacterized LOC125044178 Neighboring gene carotenoid isomerooxygenase-like Neighboring gene SURP and G-patch domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061853.1 Chromosome 35 Reference ASM1920278v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus chinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1920278v2 Primary Assembly

Genomic

  1. NC_061853.1 Reference ASM1920278v2 Primary Assembly

    Range
    37122530..37141760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047640839.1 → XP_047496795.1  carotenoid isomerooxygenase-like

    Related
    XP_047496795.1, XM_047640839.1
Nucleotide Protein
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