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LOC125042389 cell surface glycoprotein 1-like [ Penaeus chinensis ]

Gene ID: 125042389, updated on 30-Nov-2023

Summary

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Gene symbol
LOC125042389
Gene description
cell surface glycoprotein 1-like
See related
EnsemblRapid:LOC125042389
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus chinensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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Genomic context

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See LOC125042389 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1920278v2 (GCF_019202785.1) 32 NC_061850.1 (1340898..1395018)

Chromosome 32 - NC_061850.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit gamma, mitochondrial-like Neighboring gene U3 small nucleolar RNA-associated protein 25 homolog Neighboring gene uncharacterized LOC125042390 Neighboring gene kynurenine 3-monooxygenase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061850.1 Chromosome 32 Reference ASM1920278v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell surface glycoprotein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus chinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1920278v2 Primary Assembly

Genomic

  1. NC_061850.1 Reference ASM1920278v2 Primary Assembly

    Range
    1340898..1395018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047637990.1 → XP_047493946.1  cell surface glycoprotein 1-like isoform X2

    Related
    XP_047493946.1, XM_047637990.1

  2. XM_047637989.1 → XP_047493945.1  cell surface glycoprotein 1-like isoform X1

    Related
    XP_047493945.1, XM_047637989.1
Nucleotide Protein
Heading Accession and Version

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