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pleca plectin a [ Mugil cephalus (flathead mullet) ]

Gene ID: 125019476, updated on 22-Mar-2024

Summary

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Gene symbol
pleca
Gene description
plectin a
See related
EnsemblRapid:ENSMGCG00000013499
Gene type
protein coding
RefSeq status
MODEL
Organism
Mugil cephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Mugilomorphae; Mugilidae; Mugil
Orthologs
zebrafish all
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Genomic context

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See pleca in Genome Data Viewer
Location:
chromosome: 14
Exon count:
47
Annotation release Status Assembly Chr Location
100 current CIBA_Mcephalus_1.1 (GCF_022458985.1) 14 NC_061783.1 (19327301..19435927, complement)

Chromosome 14 - NC_061783.1Genomic Context describing neighboring genes Neighboring gene epiplakin 1 Neighboring gene doublesex- and mab-3-related transcription factor B1-like Neighboring gene eukaryotic translation initiation factor 3, subunit E, b Neighboring gene transmembrane protein 74

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061783.1 Chromosome 14 Reference CIBA_Mcephalus_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mugil cephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CIBA_Mcephalus_1.1

Genomic

  1. NC_061783.1 Reference CIBA_Mcephalus_1.1

    Range
    19327301..19435927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047604253.1 → XP_047460209.1  plectin a isoform X4

  2. XM_047604251.1 → XP_047460207.1  plectin a isoform X2

  3. XM_047604252.1 → XP_047460208.1  plectin a isoform X3

  4. XM_047604250.1 → XP_047460206.1  plectin a isoform X1

  5. XM_047604254.1 → XP_047460210.1  plectin a isoform X5

    Related
    ENSMGCP00000039374.1, ENSMGCT00000040070.1

  6. XM_047604264.1 → XP_047460220.1  plectin a isoform X14

    Related
    ENSMGCP00000039370.1, ENSMGCT00000040066.1

  7. XM_047604262.1 → XP_047460218.1  plectin a isoform X12

  8. XM_047604268.1 → XP_047460224.1  plectin a isoform X18

    Related
    ENSMGCP00000039369.1, ENSMGCT00000040065.1

  9. XM_047604266.1 → XP_047460222.1  plectin a isoform X16

  10. XM_047604269.1 → XP_047460225.1  plectin a isoform X19

    Related
    ENSMGCP00000039295.1, ENSMGCT00000039991.1

  11. XM_047604267.1 → XP_047460223.1  plectin a isoform X17

  12. XM_047604263.1 → XP_047460219.1  plectin a isoform X13

  13. XM_047604259.1 → XP_047460215.1  plectin a isoform X10

    Related
    ENSMGCP00000039294.1, ENSMGCT00000039990.1

  14. XM_047604256.1 → XP_047460212.1  plectin a isoform X7

    Related
    ENSMGCP00000039293.1, ENSMGCT00000039989.1

  15. XM_047604255.1 → XP_047460211.1  plectin a isoform X6

  16. XM_047604257.1 → XP_047460213.1  plectin a isoform X8

  17. XM_047604260.1 → XP_047460216.1  plectin a isoform X11

  18. XM_047604258.1 → XP_047460214.1  plectin a isoform X9

  19. XM_047604265.1 → XP_047460221.1  plectin a isoform X15

    Related
    ENSMGCP00000039363.1, ENSMGCT00000040059.1

  20. XM_047604271.1 → XP_047460227.1  plectin a isoform X21

  21. XM_047604270.1 → XP_047460226.1  plectin a isoform X20

Nucleotide Protein
Heading Accession and Version

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