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ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [ Mugil cephalus (flathead mullet) ]

Gene ID: 125004306, updated on 22-Mar-2024

Summary

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Gene symbol
ndst3
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
See related
EnsemblRapid:ENSMGCG00000016099
Gene type
protein coding
RefSeq status
MODEL
Organism
Mugil cephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Mugilomorphae; Mugilidae; Mugil
Orthologs
zebrafish all
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Genomic context

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See ndst3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current CIBA_Mcephalus_1.1 (GCF_022458985.1) 2 NC_061771.1 (13435840..13479358)

Chromosome 2 - NC_061771.1Genomic Context describing neighboring genes Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 Neighboring gene UDP glycosyltransferase 8 Neighboring gene serine protease 12 Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061771.1 Chromosome 2 Reference CIBA_Mcephalus_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mugil cephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CIBA_Mcephalus_1.1

Genomic

  1. NC_061771.1 Reference CIBA_Mcephalus_1.1

    Range
    13435840..13479358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047578820.1 → XP_047434776.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X1

  2. XM_047578821.1 → XP_047434777.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X2

    Related
    ENSMGCP00000046258.1, ENSMGCT00000047167.1

  3. XM_047578819.1 → XP_047434775.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X1

    Related
    ENSMGCP00000046266.1, ENSMGCT00000047174.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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