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unm_hu7910 un-named hu7910 [ Mugil cephalus (flathead mullet) ]

Gene ID: 124995579, updated on 22-Mar-2024

Summary

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Gene symbol
unm_hu7910
Gene description
un-named hu7910
See related
EnsemblRapid:ENSMGCG00000014451
Gene type
protein coding
RefSeq status
MODEL
Organism
Mugil cephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Mugilomorphae; Mugilidae; Mugil
Orthologs
zebrafish all
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Genomic context

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See unm_hu7910 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
29
Annotation release Status Assembly Chr Location
100 current CIBA_Mcephalus_1.1 (GCF_022458985.1) 18 NC_061787.1 (744512..779332)

Chromosome 18 - NC_061787.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 4 subunit alpha-like Neighboring gene uncharacterized LOC124995762 Neighboring gene clavesin-1-like Neighboring gene RIO kinase 3 (yeast)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061787.1 Chromosome 18 Reference CIBA_Mcephalus_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mugil cephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CIBA_Mcephalus_1.1

Genomic

  1. NC_061787.1 Reference CIBA_Mcephalus_1.1

    Range
    744512..779332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047568067.1 → XP_047424023.1  aspartyl/asparaginyl beta-hydroxylase isoform X7

    Related
    ENSMGCP00000041359.1, ENSMGCT00000042150.1

  2. XM_047568061.1 → XP_047424017.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

  3. XM_047568064.1 → XP_047424020.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

  4. XM_047568062.1 → XP_047424018.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

  5. XM_047568063.1 → XP_047424019.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

  6. XM_047568066.1 → XP_047424022.1  aspartyl/asparaginyl beta-hydroxylase isoform X6

  7. XM_047568065.1 → XP_047424021.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

Nucleotide Protein
Heading Accession and Version

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