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Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124990558, updated on 22-Mar-2024

Summary

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Gene symbol
Dnajb6
Gene description
DnaJ heat shock protein family (Hsp40) member B6
See related
EnsemblRapid:ENSSCRG00010013779
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Orthologs
human mouse all
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Genomic context

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See Dnajb6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 8 NC_062220.1 (1312693..1371010, complement)

Chromosome 8 - NC_062220.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene uncharacterized LOC124991582 Neighboring gene uncharacterized LOC124991543 Neighboring gene uncharacterized LOC124991544 Neighboring gene small nucleolar RNA U13 Neighboring gene ubiquitin protein ligase E3C Neighboring gene motor neuron and pancreas homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062220.1 Chromosome 8 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062220.1 Reference mSciCar1.2

    Range
    1312693..1371010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047560681.1 → XP_047416637.1  dnaJ homolog subfamily B member 6 isoform X2

  2. XM_047560679.1 → XP_047416635.1  dnaJ homolog subfamily B member 6 isoform X1

  3. XM_047560680.1 → XP_047416636.1  dnaJ homolog subfamily B member 6 isoform X1

  4. XM_047560682.1 → XP_047416638.1  dnaJ homolog subfamily B member 6 isoform X3

    Related
    ENSSCRP00010015919.1, ENSSCRT00010017873.1
Nucleotide Protein
Heading Accession and Version

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