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LOC124984400 mannose-binding protein A-like [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124984400, updated on 31-Jan-2024

Summary

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Gene symbol
LOC124984400
Gene description
mannose-binding protein A-like
See related
EnsemblRapid:ENSSCRG00010005635
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
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Genomic context

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See LOC124984400 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 5 NC_062217.1 (130785446..130794493, complement)

Chromosome 5 - NC_062217.1Genomic Context describing neighboring genes Neighboring gene protein YIPF4-like Neighboring gene surfactant protein D Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene methionine adenosyltransferase 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062217.1 Chromosome 5 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062217.1 Reference mSciCar1.2

    Range
    130785446..130794493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047551943.1 → XP_047407899.1  mannose-binding protein A-like

    UniProtKB/TrEMBL
    A0AA41T1U0

  2. XM_047551944.1 → XP_047407900.1  mannose-binding protein A-like

    UniProtKB/TrEMBL
    A0AA41T1U0
    Related
    ENSSCRP00010006469.1, ENSSCRT00010007261.1
Nucleotide Protein
Heading Accession and Version

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