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Aldh6a1 aldehyde dehydrogenase 6 family member A1 [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124976685, updated on 22-Mar-2024

Summary

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Gene symbol
Aldh6a1
Gene description
aldehyde dehydrogenase 6 family member A1
See related
EnsemblRapid:ENSSCRG00010002938
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Orthologs
human mouse all
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Genomic context

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See Aldh6a1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 2 NC_062214.1 (172441716..172461404, complement)

Chromosome 2 - NC_062214.1Genomic Context describing neighboring genes Neighboring gene basal body orientation factor 1 Neighboring gene E3 ubiquitin-protein ligase RNF113A-like Neighboring gene uncharacterized LOC124976691 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062214.1 Chromosome 2 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables malonate-semialdehyde dehydrogenase (acetylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in thymine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062214.1 Reference mSciCar1.2

    Range
    172441716..172461404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047539490.1 → XP_047395446.1  methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

    Related
    ENSSCRP00010003364.1, ENSSCRT00010003779.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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