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Sacm1l SAC1 like phosphatidylinositide phosphatase [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124968324, updated on 22-Mar-2024

Summary

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Gene symbol
Sacm1l
Gene description
SAC1 like phosphatidylinositide phosphatase
See related
EnsemblRapid:ENSSCRG00010024331
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Orthologs
human mouse all
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Genomic context

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See Sacm1l in Genome Data Viewer
Location:
chromosome: 17
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 17 NC_062229.1 (25081089..25134522, complement)

Chromosome 17 - NC_062229.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene leucine zipper transcription factor like 1 Neighboring gene polyribonucleotide 5'-hydroxyl-kinase Clp1-like Neighboring gene solute carrier family 6 member 20 Neighboring gene uncharacterized LOC124968327 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene LIM domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062229.1 Chromosome 17 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-3-phosphatase SAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062229.1 Reference mSciCar1.2

    Range
    25081089..25134522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047530603.1 → XP_047386559.1  phosphatidylinositol-3-phosphatase SAC1

    Related
    ENSSCRP00010028001.1, ENSSCRT00010031556.1
Nucleotide Protein
Heading Accession and Version

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