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Ano5 anoctamin 5 [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124958908, updated on 22-Mar-2024

Summary

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Gene symbol
Ano5
Gene description
anoctamin 5
See related
EnsemblRapid:ENSSCRG00010024760
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Orthologs
human mouse all
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Genomic context

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See Ano5 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 11 NC_062223.1 (54847000..54935809, complement)

Chromosome 11 - NC_062223.1Genomic Context describing neighboring genes Neighboring gene G patch domain-containing protein 11-like Neighboring gene putative high mobility group protein B1-like 1 Neighboring gene solute carrier family 17 member 6 Neighboring gene uncharacterized LOC124995328 Neighboring gene neural EGFL like 1 Neighboring gene isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062223.1 Chromosome 11 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062223.1 Reference mSciCar1.2

    Range
    54847000..54935809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047517492.1 → XP_047373448.1  anoctamin-5 isoform X3

  2. XM_047517491.1 → XP_047373447.1  anoctamin-5 isoform X2

  3. XM_047517490.1 → XP_047373446.1  anoctamin-5 isoform X1

  4. XM_047517494.1 → XP_047373450.1  anoctamin-5 isoform X5

    Related
    ENSSCRP00010028531.1, ENSSCRT00010032146.1

  5. XM_047517493.1 → XP_047373449.1  anoctamin-5 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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