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LOC124901333 uncharacterized LOC124901333 [ Homo sapiens (human) ]

Gene ID: 124901333, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124901333
Gene description
uncharacterized LOC124901333
See related
Ensembl:ENSG00000227885
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124901333 in Genome Data Viewer
Location:
6p12.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (53739482..53793675, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (53540977..53633782, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 10125 Neighboring gene long intergenic non-protein coding RNA 1564 Neighboring gene Sharpr-MPRA regulatory region 14005 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24699 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24700 Neighboring gene Sharpr-MPRA regulatory region 11274 Neighboring gene kelch like family member 31 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:53587553-53587738 Neighboring gene uncharacterized LOC124901334 Neighboring gene NANOG hESC enhancer GRCh37_chr6:53595032-53595549 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:53599001-53600200 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17293 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17294 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:53659875-53660587 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17295 Neighboring gene Sharpr-MPRA regulatory region 10889 Neighboring gene leucine rich repeat containing 1 Neighboring gene Sharpr-MPRA regulatory region 6720 Neighboring gene uncharacterized LOC101927189 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:53810369-53810988 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:53810989-53811607 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:53826656-53827156 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:53841998-53842202 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:53848425-53849624

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    53739482..53793675 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059619.1 RNA Sequence

  2. XR_007059616.1 RNA Sequence

  3. XR_007059618.1 RNA Sequence

  4. XR_007059615.1 RNA Sequence

  5. XR_007059617.1 RNA Sequence

    Related
    ENST00000648812.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    53540977..53633782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076849.1 RNA Sequence

  2. XR_007076847.1 RNA Sequence

  3. XR_007076850.1 RNA Sequence

  4. XR_007076846.1 RNA Sequence

  5. XR_007076848.1 RNA Sequence

  6. XR_007076845.1 RNA Sequence

Nucleotide Protein
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