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LOC124890402 probable galacturonosyltransferase-like 1 [ Capsicum annuum ]

Gene ID: 124890402, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124890402
Gene description
probable galacturonosyltransferase-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC124890402 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) Unplaced Scaffold NW_025822785.1 (366087..369055)

NW_025822785.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit a-like Neighboring gene E3 ubiquitin-protein ligase RNF185-like Neighboring gene uncharacterized LOC124890403 Neighboring gene serine/threonine receptor-like kinase NFP

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025822785 Unplaced Scaffold Reference UCD10Xv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NW_025822785.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    366087..369055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047402243.1 → XP_047258199.1  probable galacturonosyltransferase-like 1

    UniProtKB/TrEMBL
    A0A2G3A5R1
Nucleotide Protein
Heading Accession and Version

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