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capn3a calpain 3a, (p94) [ Girardinichthys multiradiatus ]

Gene ID: 124856039, updated on 22-Mar-2024

Summary

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Gene symbol
capn3a
Gene description
calpain 3a, (p94)
See related
EnsemblRapid:ENSGMLG00005004394
Gene type
protein coding
RefSeq status
MODEL
Organism
Girardinichthys multiradiatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Goodeidae; Girardinichthys
Orthologs
human zebrafish all
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Genomic context

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See capn3a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
21
Annotation release Status Assembly Chr Location
100 current DD_fGirMul_XY1 (GCF_021462225.1) 19 NC_061811.1 (32287438..32322479)

Chromosome 19 - NC_061811.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 87A-like Neighboring gene glucosidase, alpha; neutral C Neighboring gene zinc finger protein 106a Neighboring gene proton activated chloride channel 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061811.1 Chromosome 19 Reference DD_fGirMul_XY1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Girardinichthys multiradiatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_fGirMul_XY1

Genomic

  1. NC_061811.1 Reference DD_fGirMul_XY1

    Range
    32287438..32322479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047346235.1 → XP_047202191.1  calpain-3 isoform X1

  2. XM_047346236.1 → XP_047202192.1  calpain-3 isoform X2

    Related
    ENSGMLP00005007701.1, ENSGMLT00005007893.1
Nucleotide Protein
Heading Accession and Version

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