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LOC124657571 carboxyl-terminal-processing peptidase 2, chloroplastic-like [ Lolium rigidum ]

Gene ID: 124657571, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124657571
Gene description
carboxyl-terminal-processing peptidase 2, chloroplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Lolium rigidum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Poodae; Poeae; Poeae Chloroplast Group 2 (Poeae type); Loliodinae; Loliinae; Lolium
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Genomic context

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See LOC124657571 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
100 current APGP_CSIRO_Lrig_0.1 (GCF_022539505.1) 5 NC_061512.1 (263003965..263009988)

Chromosome 5 - NC_061512.1Genomic Context describing neighboring genes Neighboring gene phytoene synthase 3, chloroplastic-like Neighboring gene protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic-like Neighboring gene exosome complex component csl4-like Neighboring gene protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061512.1 Chromosome 5 Reference APGP_CSIRO_Lrig_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 2, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lolium rigidum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference APGP_CSIRO_Lrig_0.1

Genomic

  1. NC_061512.1 Reference APGP_CSIRO_Lrig_0.1

    Range
    263003965..263009988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047196099.1 → XP_047052055.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like

Nucleotide Protein
Heading Accession and Version

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