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LOC124540775 irregular chiasm C-roughest protein-like [ Vanessa cardui ]

Gene ID: 124540775, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124540775
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:ENSVCAG00000000082
Gene type
protein coding
RefSeq status
MODEL
Organism
Vanessa cardui
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Vanessa
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Genomic context

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See LOC124540775 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ilVanCard2.1 (GCF_905220365.1) 26 NC_061148.1 (5287850..5396374, complement)

Chromosome 26 - NC_061148.1Genomic Context describing neighboring genes Neighboring gene irregular chiasm C-roughest protein-like Neighboring gene uncharacterized LOC124540832 Neighboring gene irregular chiasm C-roughest protein-like Neighboring gene uncharacterized LOC124540827

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061148.1 Chromosome 26 Reference ilVanCard2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vanessa cardui Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilVanCard2.1

Genomic

  1. NC_061148.1 Reference ilVanCard2.1

    Range
    5287850..5396374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047118484.1 → XP_046974440.1  irregular chiasm C-roughest protein-like

    Related
    ENSVCAP00000000075.1, ENSVCAT00000000148.1
Nucleotide Protein
Heading Accession and Version

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