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GCNT2 glucosaminyl (N-acetyl) transferase 2 (I blood group) [ Lynx rufus (bobcat) ]

Gene ID: 124528243, updated on 22-Mar-2024

Summary

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Gene symbol
GCNT2
Gene description
glucosaminyl (N-acetyl) transferase 2 (I blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See GCNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814878.1 (128426875..128510502)

NW_025814878.1Genomic Context describing neighboring genes Neighboring gene transcription factor AP-2 alpha Neighboring gene F-actin-capping protein subunit alpha-1-like Neighboring gene chromosome unknown C6orf52 homolog Neighboring gene PAK1 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814878 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814878.1 Reference mLynRuf1.p

    Range
    128426875..128510502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047101733.1 → XP_046957689.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase isoform X1

  2. XM_047101736.1 → XP_046957692.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase isoform X4

  3. XM_047101734.1 → XP_046957690.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase isoform X2

  4. XM_047101735.1 → XP_046957691.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase isoform X3

Nucleotide Protein
Heading Accession and Version

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