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PGK2 phosphoglycerate kinase 2 [ Lynx rufus (bobcat) ]

Gene ID: 124527984, updated on 22-Mar-2024

Summary

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Gene symbol
PGK2
Gene description
phosphoglycerate kinase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human all
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Genomic context

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See PGK2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814878.1 (98829368..98830621)

NW_025814878.1Genomic Context describing neighboring genes Neighboring gene cysteine rich secretory protein 1 Neighboring gene serine/threonine-protein kinase Chk1-like Neighboring gene cysteine-rich secretory protein 2-like Neighboring gene cysteine-rich secretory protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814878 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm fibrous sheath IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycerate kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814878.1 Reference mLynRuf1.p

    Range
    98829368..98830621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047101286.1 → XP_046957242.1  phosphoglycerate kinase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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