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PLCD1 phospholipase C delta 1 [ Lynx rufus (bobcat) ]

Gene ID: 124526362, updated on 22-Mar-2024

Summary

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Gene symbol
PLCD1
Gene description
phospholipase C delta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See PLCD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814867.1 (6064076..6086796, complement)

NW_025814867.1Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase like Neighboring gene 40S ribosomal protein S3a-like Neighboring gene uncharacterized LOC124526363 Neighboring gene uncharacterized LOC124526364 Neighboring gene villin like Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene uncharacterized LOC124526007 Neighboring gene acetyl-CoA acyltransferase 1 Neighboring gene MYD88 innate immune signal transduction adaptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814867 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814867.1 Reference mLynRuf1.p

    Range
    6064076..6086796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047099331.1 → XP_046955287.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X3

  2. XM_047099330.1 → XP_046955286.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2

  3. XM_047099332.1 → XP_046955288.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X4

  4. XM_047099333.1 → XP_046955289.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X5

  5. XM_047099329.1 → XP_046955285.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1

Nucleotide Protein
Heading Accession and Version

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