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COG5 component of oligomeric golgi complex 5 [ Lynx rufus (bobcat) ]

Gene ID: 124523634, updated on 22-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814856.1 (77880802..78203132)

NW_025814856.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U109 Neighboring gene B cell receptor associated protein 29 Neighboring gene dihydrouridine synthase 4 like Neighboring gene G protein-coupled receptor 22 Neighboring gene HMG-box transcription factor 1 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene thioredoxin-related transmembrane protein 2-like Neighboring gene uncharacterized LOC124524501 Neighboring gene uncharacterized LOC124524502

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814856 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814856.1 Reference mLynRuf1.p

    Range
    77880802..78203132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047095454.1 → XP_046951410.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    Conserved Domains (1) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5

  2. XM_047095453.1 → XP_046951409.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    Conserved Domains (1) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5

  3. XM_047095455.1 → XP_046951411.1  conserved oligomeric Golgi complex subunit 5 isoform X2

Nucleotide Protein
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