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ALOX12 arachidonate 12-lipoxygenase, 12S type [ Lynx rufus (bobcat) ]

Gene ID: 124519666, updated on 22-Mar-2024

Summary

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Gene symbol
ALOX12
Gene description
arachidonate 12-lipoxygenase, 12S type
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See ALOX12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814843.1 (10932219..10943963, complement)

NW_025814843.1Genomic Context describing neighboring genes Neighboring gene BPTF associated chromatin complex component 1 Neighboring gene ribonuclease K Neighboring gene uncharacterized LOC124519554 Neighboring gene polyunsaturated fatty acid (12S)/(13S)-lipoxygenase, epidermal-type-like Neighboring gene polyunsaturated fatty acid (12S)/(13S)-lipoxygenase, epidermal-type-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814843 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 12(S)-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arachidonate 15-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables linoleate 13S-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyunsaturated fatty acid lipoxygenase ALOX12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814843.1 Reference mLynRuf1.p

    Range
    10932219..10943963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047090065.1 → XP_046946021.1  polyunsaturated fatty acid lipoxygenase ALOX12 isoform X2

  2. XM_047090064.1 → XP_046946020.1  polyunsaturated fatty acid lipoxygenase ALOX12 isoform X1

  3. XM_047090068.1 → XP_046946024.1  polyunsaturated fatty acid lipoxygenase ALOX12 isoform X5

  4. XM_047090067.1 → XP_046946023.1  polyunsaturated fatty acid lipoxygenase ALOX12 isoform X4

  5. XM_047090066.1 → XP_046946022.1  polyunsaturated fatty acid lipoxygenase ALOX12 isoform X3

Nucleotide Protein
Heading Accession and Version

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