U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPE ribulose-5-phosphate-3-epimerase [ Lynx rufus (bobcat) ]

Gene ID: 124516256, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RPE
Gene description
ribulose-5-phosphate-3-epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814834.1 (26658217..26674002, complement)

NW_025814834.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase long chain Neighboring gene 60S ribosomal protein L26-like Neighboring gene KAT8 regulatory NSL complex subunit 1 like Neighboring gene unc-80 homolog, NALCN channel complex subunit Neighboring gene microtubule associated protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025814834 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribulose-phosphate 3-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ribulose-phosphate 3-epimerase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814834.1 Reference mLynRuf1.p

    Range
    26658217..26674002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047085524.1 → XP_046941480.1  ribulose-phosphate 3-epimerase isoform X2

  2. XM_047085523.1 → XP_046941479.1  ribulose-phosphate 3-epimerase isoform X1

    Conserved Domains (1) summary
    cd00429
    Location:6 → 221
    RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...

  3. XM_047085527.1 → XP_046941483.1  ribulose-phosphate 3-epimerase isoform X4

  4. XM_047085525.1 → XP_046941481.1  ribulose-phosphate 3-epimerase isoform X3

  5. XM_047085528.1 → XP_046941484.1  ribulose-phosphate 3-epimerase isoform X5

  6. XM_047085530.1 → XP_046941486.1  ribulose-phosphate 3-epimerase isoform X6

  7. XM_047085529.1 → XP_046941485.1  ribulose-phosphate 3-epimerase isoform X6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.