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SELP selectin P [ Lynx rufus (bobcat) ]

Gene ID: 124510233, updated on 22-Mar-2024

Summary

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Gene symbol
SELP
Gene description
selectin P
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See SELP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814829.1 (51467305..51507900)

NW_025814829.1Genomic Context describing neighboring genes Neighboring gene selectin L Neighboring gene uncharacterized LOC124510235 Neighboring gene coagulation factor V Neighboring gene ERI1 exoribonuclease 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814829 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte tethering or rolling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
P-selectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814829.1 Reference mLynRuf1.p

    Range
    51467305..51507900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047077033.1 → XP_046932989.1  P-selectin isoform X1

  2. XM_047077035.1 → XP_046932991.1  P-selectin isoform X3

  3. XM_047077036.1 → XP_046932992.1  P-selectin isoform X4

  4. XM_047077034.1 → XP_046932990.1  P-selectin isoform X2

  5. XM_047077038.1 → XP_046932994.1  P-selectin isoform X6

  6. XM_047077037.1 → XP_046932993.1  P-selectin isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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