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DYSF dysferlin [ Lynx rufus (bobcat) ]

Gene ID: 124504085, updated on 22-Mar-2024

Summary

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Gene symbol
DYSF
Gene description
dysferlin
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See DYSF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
56
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814896.1 (88409827..88635589)

NW_025814896.1Genomic Context describing neighboring genes Neighboring gene ATP synthase F(0) complex subunit C3, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger protein 638 Neighboring gene cytochrome P450 26B1 Neighboring gene exocyst complex component 6B Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814896 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814896.1 Reference mLynRuf1.p

    Range
    88409827..88635589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047069397.1 → XP_046925353.1  dysferlin isoform X3

  2. XM_047069398.1 → XP_046925354.1  dysferlin isoform X4

  3. XM_047069395.1 → XP_046925351.1  dysferlin isoform X1

  4. XM_047069396.1 → XP_046925352.1  dysferlin isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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