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INPP4A inositol polyphosphate-4-phosphatase type I A [ Lynx rufus (bobcat) ]

Gene ID: 124503451, updated on 22-Mar-2024

Summary

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Gene symbol
INPP4A
Gene description
inositol polyphosphate-4-phosphatase type I A
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See INPP4A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814896.1 (61625654..61762504, complement)

NW_025814896.1Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A Neighboring gene cytochrome c oxidase assembly factor 5 Neighboring gene unc-50 inner nuclear membrane RNA binding protein Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene cyclic nucleotide gated channel subunit alpha 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814896 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate-4-phosphatase type I A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814896.1 Reference mLynRuf1.p

    Range
    61625654..61762504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047068515.1 → XP_046924471.1  inositol polyphosphate-4-phosphatase type I A isoform X2

  2. XM_047068516.1 → XP_046924472.1  inositol polyphosphate-4-phosphatase type I A isoform X3

    Conserved Domains (1) summary
    cd04048
    Location:44 → 157
    C2A_Copine; C2 domain first repeat in Copine

  3. XM_047068512.1 → XP_046924468.1  inositol polyphosphate-4-phosphatase type I A isoform X1

  4. XM_047068514.1 → XP_046924470.1  inositol polyphosphate-4-phosphatase type I A isoform X1

  5. XM_047068513.1 → XP_046924469.1  inositol polyphosphate-4-phosphatase type I A isoform X1

Nucleotide Protein
Heading Accession and Version

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