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B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Lynx rufus (bobcat) ]

Gene ID: 124502179, updated on 22-Mar-2024

Summary

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Gene symbol
B4GALNT1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lynx rufus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
Orthologs
human mouse all
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Genomic context

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See B4GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mLynRuf1.p (GCF_022079265.1) Unplaced Scaffold NW_025814889.1 (83928059..83935609, complement)

NW_025814889.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene solute carrier family 26 member 10-like Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025814889 Unplaced Scaffold Reference mLynRuf1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022079265.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLynRuf1.p

Genomic

  1. NW_025814889.1 Reference mLynRuf1.p

    Range
    83928059..83935609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047066702.1 → XP_046922658.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

  2. XM_047066703.1 → XP_046922659.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X3

  3. XM_047066701.1 → XP_046922657.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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