U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Scgdelta sarcoglycan delta [ Vespa crabro (European hornet) ]

Gene ID: 124431718, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
Scgdelta
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSVCRG00010007967
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespa crabro
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespa
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Scgdelta in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
100 current iyVesCrab1.2 (GCF_910589235.1) 22 NC_060976.1 (3924606..4080940, complement)

Chromosome 22 - NC_060976.1Genomic Context describing neighboring genes Neighboring gene protein Cep78 homolog Neighboring gene phosphodiesterase 8 Neighboring gene uncharacterized LOC124431860 Neighboring gene proton channel OtopLc-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_060976.1 Chromosome 22 Reference iyVesCrab1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolutionary History of the Hymenoptera. Peters RS, et al. Curr Biol, 2017 Apr 3. PMID 28343967
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vespa crabro Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyVesCrab1.2

Genomic

  1. NC_060976.1 Reference iyVesCrab1.2

    Range
    3924606..4080940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046979918.1 → XP_046835874.1  zeta-sarcoglycan isoform X1

  2. XM_046979917.1 → XP_046835873.1  zeta-sarcoglycan isoform X1

  3. XM_046979916.1 → XP_046835872.1  zeta-sarcoglycan isoform X1

  4. XM_046979922.1 → XP_046835878.1  zeta-sarcoglycan isoform X2

  5. XM_046979920.1 → XP_046835876.1  zeta-sarcoglycan isoform X2

  6. XM_046979923.1 → XP_046835879.1  zeta-sarcoglycan isoform X2

  7. XM_046979924.1 → XP_046835880.1  zeta-sarcoglycan isoform X2

  8. XM_046979921.1 → XP_046835877.1  zeta-sarcoglycan isoform X2

  9. XM_046979926.1 → XP_046835882.1  zeta-sarcoglycan isoform X2

    Related
    ENSVCRP00010013870.1, ENSVCRT00010016398.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases