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rt Protein O-mannosyltransferase rt [ Vespa crabro (European hornet) ]

Gene ID: 124431589, updated on 10-Oct-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
See related
EnsemblRapid:ENSVCRG00010008523
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespa crabro
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespa
Orthologs
fruit fly honey bee all
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Genomic context

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Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
100 current iyVesCrab1.2 (GCF_910589235.1) 21 NC_060975.1 (298821..301812, complement)

Chromosome 21 - NC_060975.1Genomic Context describing neighboring genes Neighboring gene Schwannomin interacting protein 1 Neighboring gene Rho-associated, coiled-coil containing protein kinase 2 Neighboring gene uncharacterized LOC124431316 Neighboring gene ATPase WRNIP1-like Neighboring gene methyltransferase-like 26 Neighboring gene dnaJ homolog subfamily C member 21 Neighboring gene WD repeat-containing protein Rbcn-3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060975.1 Chromosome 21 Reference iyVesCrab1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary History of the Hymenoptera. Peters RS, et al. Curr Biol, 2017 Apr 3. PMID 28343967
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespa crabro Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyVesCrab1.2

Genomic

  1. NC_060975.1 Reference iyVesCrab1.2

    Range
    298821..301812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046979668.1 → XP_046835624.1  protein O-mannosyltransferase 1 isoform X2

  2. XM_046979667.1 → XP_046835623.1  protein O-mannosyltransferase 1 isoform X1

    Related
    ENSVCRP00010014947.1, ENSVCRT00010017639.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases