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sfl N-deacetylase and N-sulfotransferase sfl [ Vespa crabro (European hornet) ]

Gene ID: 124422631, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
See related
EnsemblRapid:ENSVCRG00010011411
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespa crabro
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespa
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current iyVesCrab1.2 (GCF_910589235.1) 3 NC_060957.1 (12742521..13032192)

Chromosome 3 - NC_060957.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124422634 Neighboring gene 40S ribosomal protein S13-like Neighboring gene uncharacterized LOC124422633 Neighboring gene putative ammonium transporter 1 Neighboring gene probable serine/threonine-protein kinase kinX Neighboring gene mitochondrial calcium uniporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060957.1 Chromosome 3 Reference iyVesCrab1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary History of the Hymenoptera. Peters RS, et al. Curr Biol, 2017 Apr 3. PMID 28343967

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespa crabro Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyVesCrab1.2

Genomic

  1. NC_060957.1 Reference iyVesCrab1.2

    Range
    12742521..13032192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046959355.1 → XP_046815311.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase isoform X1

    Related
    ENSVCRP00010020372.1, ENSVCRT00010023730.1
    Conserved Domains (2) summary
    pfam00685
    Location:608 → 856
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:95 → 519
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_046959357.1 → XP_046815313.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase isoform X2

    Conserved Domains (2) summary
    pfam00685
    Location:544 → 792
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:95 → 455
    HSNSD; heparan sulfate-N-deacetylase

  3. XM_046959354.1 → XP_046815310.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase isoform X1

    Conserved Domains (2) summary
    pfam00685
    Location:608 → 856
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:95 → 519
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

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