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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Silurus meridionalis ]

Gene ID: 124399071, updated on 22-Mar-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Locus tag
HF521_006014
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
zebrafish all
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 16 NC_060899.1 (4836331..4846505)

Chromosome 16 - NC_060899.1Genomic Context describing neighboring genes Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene solute carrier family 25 member 55b Neighboring gene tetraspanin 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060899.1 Chromosome 16 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060899.1 Reference ASM1480568v1 Primary Assembly

    Range
    4836331..4846505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046869768.1 → XP_046725724.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  2. XM_046869767.1 → XP_046725723.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  3. XM_046869766.1 → XP_046725722.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

  4. XM_046869765.1 → XP_046725721.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

  5. XM_046869769.1 → XP_046725725.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

Nucleotide Protein
Heading Accession and Version

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