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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein [ Silurus meridionalis ]

Gene ID: 124398843, updated on 22-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
Locus tag
HF521_005876
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 16 NC_060899.1 (408846..420147)

Chromosome 16 - NC_060899.1Genomic Context describing neighboring genes Neighboring gene necdin-like 2 Neighboring gene DNA-binding protein inhibitor ID-1-like Neighboring gene histocompatibility (minor) 13 Neighboring gene rab GDP dissociation inhibitor alpha-like Neighboring gene protein kinase C and casein kinase substrate in neurons protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060899.1 Chromosome 16 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060899.1 Reference ASM1480568v1 Primary Assembly

    Range
    408846..420147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046869292.1 → XP_046725248.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A8T0AU96
Nucleotide Protein
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