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rxylt1 ribitol xylosyltransferase 1 [ Silurus meridionalis ]

Gene ID: 124396125, updated on 22-Mar-2024

Summary

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Gene symbol
rxylt1
Gene description
ribitol xylosyltransferase 1
Locus tag
HF521_003671
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
human zebrafish all
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Genomic context

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See rxylt1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 13 NC_060896.1 (8551275..8557485)

Chromosome 13 - NC_060896.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124396177 Neighboring gene protein C19orf12 homolog Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial-like Neighboring gene SLIT-ROBO Rho GTPase activating protein 1a Neighboring gene protein mono-ADP-ribosyltransferase PARP12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060896.1 Chromosome 13 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060896.1 Reference ASM1480568v1 Primary Assembly

    Range
    8551275..8557485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046865132.1 → XP_046721088.1  ribitol-5-phosphate xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A8T0B476
Nucleotide Protein
Heading Accession and Version

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