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p3h2 prolyl 3-hydroxylase 2 [ Silurus meridionalis ]

Gene ID: 124391591, updated on 22-Mar-2024

Summary

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Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
Locus tag
HF521_022620
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
human zebrafish all
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Genomic context

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See p3h2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 9 NC_060892.1 (23050169..23081572, complement)

Chromosome 9 - NC_060892.1Genomic Context describing neighboring genes Neighboring gene one cut homeobox 3a Neighboring gene uncharacterized LOC124390853 Neighboring gene uncharacterized LOC124391491 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060892.1 Chromosome 9 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060892.1 Reference ASM1480568v1 Primary Assembly

    Range
    23050169..23081572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046858266.1 → XP_046714222.1  prolyl 3-hydroxylase 2

    UniProtKB/TrEMBL
    A0A8T0BCE8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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