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dysf dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [ Silurus meridionalis ]

Gene ID: 124386906, updated on 6-Jun-2024

Summary

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Gene symbol
dysf
Gene description
dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)
Locus tag
HF521_019623
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
human zebrafish all
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Genomic context

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See dysf in Genome Data Viewer
Location:
chromosome: 6
Exon count:
58
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 6 NC_060889.1 (14919480..14995694, complement)

Chromosome 6 - NC_060889.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124387662 Neighboring gene uncharacterized LOC124386849 Neighboring gene mastermind-like domain-containing protein 1 Neighboring gene uncharacterized LOC124387298 Neighboring gene myotubularin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060889.1 Chromosome 6 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060889.1 Reference ASM1480568v1 Primary Assembly

    Range
    14919480..14995694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046850951.1 → XP_046706907.1  dysferlin

    UniProtKB/TrEMBL
    A0A8T0BH30
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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