U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC124386622 probable polypeptide N-acetylgalactosaminyltransferase 8 [ Silurus meridionalis ]

Gene ID: 124386622, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC124386622
Gene description
probable polypeptide N-acetylgalactosaminyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC124386622 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 5 NC_060888.1 (25664066..25685182, complement)

Chromosome 5 - NC_060888.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase 2a Neighboring gene RIB43A domain with coiled-coils 2 Neighboring gene probable polypeptide N-acetylgalactosaminyltransferase 8 Neighboring gene NADH:ubiquinone oxidoreductase subunit A9a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_060888.1 Chromosome 5 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable polypeptide N-acetylgalactosaminyltransferase 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060888.1 Reference ASM1480568v1 Primary Assembly

    Range
    25664066..25685182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046850583.1 → XP_046706539.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1

  2. XM_046850585.1 → XP_046706541.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases