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piga phosphatidylinositol glycan anchor biosynthesis, class A [ Silurus meridionalis ]

Gene ID: 124383316, updated on 22-Mar-2024

Summary

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Gene symbol
piga
Gene description
phosphatidylinositol glycan anchor biosynthesis, class A
Locus tag
HF521_016103
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
human zebrafish all
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Genomic context

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See piga in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 3 NC_060886.1 (9022695..9029172)

Chromosome 3 - NC_060886.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C13orf42 Neighboring gene TLR adapter interacting with SLC15A4 on the lysosome Neighboring gene ankyrin repeat and SOCS box containing 11 Neighboring gene synaptotagmin-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060886.1 Chromosome 3 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060886.1 Reference ASM1480568v1 Primary Assembly

    Range
    9022695..9029172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046845856.1 → XP_046701812.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A

    UniProtKB/TrEMBL
    A0A8T0BS68
Nucleotide Protein
Heading Accession and Version

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