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si:dkey-219c10.4 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Silurus meridionalis ]

Gene ID: 124383065, updated on 22-Mar-2024

Summary

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Gene symbol
si:dkey-219c10.4
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Locus tag
HF521_016281
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-219c10.4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 3 NC_060886.1 (14058590..14067438, complement)

Chromosome 3 - NC_060886.1Genomic Context describing neighboring genes Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 Neighboring gene calcium channel, voltage-dependent, beta 4a subunit Neighboring gene uncharacterized LOC124383064 Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060886.1 Chromosome 3 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060886.1 Reference ASM1480568v1 Primary Assembly

    Range
    14058590..14067438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046845434.1 → XP_046701390.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    UniProtKB/TrEMBL
    A0A8T0BPZ8
Nucleotide Protein
Heading Accession and Version

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