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mgat3a beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a [ Silurus meridionalis ]

Gene ID: 124381865, updated on 22-Mar-2024

Summary

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Gene symbol
mgat3a
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a
Locus tag
HF521_015852
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
zebrafish all
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Genomic context

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See mgat3a in Genome Data Viewer
Location:
chromosome: 29
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 29 NC_060912.1 (11818242..11832515)

Chromosome 29 - NC_060912.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124381868 Neighboring gene Tu translation elongation factor, mitochondrial Neighboring gene HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 Neighboring gene complement C1q tumor necrosis factor-related protein 6-like Neighboring gene interleukin 2 receptor, beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060912.1 Chromosome 29 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060912.1 Reference ASM1480568v1 Primary Assembly

    Range
    11818242..11832515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046843746.1 → XP_046699702.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a isoform X1

  2. XM_046843747.1 → XP_046699703.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a isoform X2

    UniProtKB/TrEMBL
    A0A8T0A6J5
Nucleotide Protein
Heading Accession and Version

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