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sfrp1a secreted frizzled-related protein 1a [ Silurus meridionalis ]

Gene ID: 124380891, updated on 22-Mar-2024

Summary

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Gene symbol
sfrp1a
Gene description
secreted frizzled-related protein 1a
Locus tag
HF521_014880
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
zebrafish all
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Genomic context

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See sfrp1a in Genome Data Viewer
Location:
chromosome: 27
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 27 NC_060910.1 (16897406..16907805)

Chromosome 27 - NC_060910.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase-like 2b Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene zinc finger, matrin-type 4a Neighboring gene transcriptional and immune response regulator a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060910.1 Chromosome 27 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060910.1 Reference ASM1480568v1 Primary Assembly

    Range
    16897406..16907805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046842192.1 → XP_046698148.1  secreted frizzled-related protein 1a

    UniProtKB/TrEMBL
    A0A8T0A9J3
Nucleotide Protein
Heading Accession and Version

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