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kptn kaptin (actin binding protein) [ Silurus meridionalis ]

Gene ID: 124379246, updated on 22-Mar-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
Locus tag
HF521_013757
Gene type
protein coding
RefSeq status
MODEL
Organism
Silurus meridionalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Siluridae; Silurus
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1480568v1 (GCF_014805685.1) 25 NC_060908.1 (15930747..15936056)

Chromosome 25 - NC_060908.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124379288 Neighboring gene cone-rod homeobox Neighboring gene heterogeneous nuclear ribonucleoprotein L Neighboring gene serine and arginine rich splicing factor 7a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060908.1 Chromosome 25 Reference ASM1480568v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Silurus meridionalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480568v1 Primary Assembly

Genomic

  1. NC_060908.1 Reference ASM1480568v1 Primary Assembly

    Range
    15930747..15936056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046839482.1 → XP_046695438.1  KICSTOR complex protein kaptin isoform X2

  2. XM_046839481.1 → XP_046695437.1  KICSTOR complex protein kaptin isoform X1

    UniProtKB/TrEMBL
    A0A8T0AD41
Nucleotide Protein
Heading Accession and Version

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